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Postdoctoral Visiting Scientist – Single-Cell and Spatial Genomics

3/7/2023

 
Apply Here
Institution
Corteva Agriscience
Location
Des Moines, Iowa, USA

Description
Corteva Agrisciences has an exciting opportunity for a Postdoctoral Visiting Scientist to serve as an integral member of a team focused on implementing single-cell and spatial transcriptomics technologies and applying those technologies to conduct novel research towards the discovery of genetic and epigenetic factors driving plant tissue and cell’s responses to various internal and external inducers. The role will require strong technical skills, an ability to communicate with other scientists to accomplish objectives, and strong management skills to deliver on various technical projects. The position will be part of the Genome Sciences group, located in Johnston, IA, in the Des Moines metro area.

The ideal candidate will have strong molecular biology skills, including a deep knowledge of single-cell genomics-based applications, along with a proven familiarity with next-generation DNA & RNA sequencing technologies. The postdoctoral scientist will lead efforts to implement new single-cell and spatial platforms and technologies, conducting research and analyzing results to determine best outcomes and methodologies for various crop-related projects of interests. The postdoctoral scientist will be encouraged to communicate research outcomes through publication in peer-reviewed journals, participation in scientific community working groups, and presentations at key scientific conferences. This is an exciting opportunity where the candidate will be given direct access to a variety of cutting-edge technologies, and the opportunity to collaborate with world-class plant and molecular biology scientists.

Qualifications
  • Ph.D. in plant biology, genomics, molecular biology, or related scientific field
  • Demonstrated experience in single cell/protoplast/nuclei manipulation in plant, molecular biology, and functional genomics
  • Knowledge of plant cellular biology and bioinformatics (R, Python…)
  • Previous exposure to tissue preparation and microscopy would be a plus
  • Demonstrated ability for protocol testing and development, along with experiment planning, execution, and troubleshooting
  • Ability to work independently with minimal supervision and in a collaborative team environment
  • Excellent verbal and written communication skills, ability to disseminate complex technical issues in a clear, concise manner to a variety of audiences

Postdoctoral Fellow (Exposito-Alonso Lab)

1/30/2023

 
More Info
Institution
Carnegie Institution for Science
Location
Stanford, CA, USA
Close Date
Until filled

Description
The Exposito-Alonso Laboratory seeks to recruit a highly motivated and skilled researcher with training in molecular biology, plant genetics, or bioengineering. We aim to understand the impacts of climate change on plant species, from a molecular evolution angle. The project will leverage ecological genomics modeling to identify genes involved in dehydration tolerance and water use efficiency in Arabidopsis, and will use CRISPR-based genetic engineering, developmental genetics, and microscopy techniques to understand the molecular mechanism of such adaptive genes.

The postdoctoral fellow will be a member of the Water and Life Interface Institute (WALII). WALII studies how life interacts with water, from the molecular to the organismal level, across plants, fungi, and animals. WALII is a virtual institute, with scientists located at nine research facilities across the United States. Working together, WALII team members aim to uncover the rules by which organisms interact with water, exploring four integrated themes: 1) the physical and molecular determinants that allow organisms to survive in the solid state; 2) rehydration responses in desiccation-tolerant and -sensitive systems; 3) the molecular grammar of desiccation tolerance conferred by intrinsically disordered proteins; and 4) the short- and long-term evolutionary history of desiccation tolerance. WALII team members have diverse expertise, ranging from biophysics to plant biology, and experience with several desiccation-tolerant and -sensitive systems.

Qualifications
  • BSc or a PhD in any of the following areas: molecular biology, biochemistry, cell biology, genetics, bioengineering.
  • A track record of research productivity and independence.

CROPPS DEI Specialist

11/4/2022

 
Closed
Institution
Cornell University
Location
Ithaca, NY, USA

Description
The Center for Research on Programmable Plant Systems (CROPPS) is an NSF Science and Technology Center that is administered under the Office of the Vice Provost for Research and Innovation. CROPPS has a mission to develop new technologies that can be used to create a two-way communication system with plants and their associated organisms for the benefit of scientific research, industry and agriculture.  Alongside research, CROPPS pursues related and complementary initiatives in education, public communication, and diversity, equity and inclusion. CROPPS aims to create an inclusive environment for productive collaboration across disciplines, titles (faculty, students, and staff), and personal identities.

CROPPS seeks a DEI Specialist who will report to both the CROPPS Managing Director and the Associate Director for Diversity & Inclusion, working closely with the rest of the CROPPS leadership. The CROPPS DEI Specialist will partner with the Associate Director to plan, coordinate, execute, and document initiatives for growing diversity in the graduate student, undergraduate student, postdoctoral and faculty populations participating in CROPPS. The CROPPS Diversity Specialist will manage and track day-to-day outreach, recruitment, and retention efforts. They will communicate with CROPPS partner institutions’ offices of student disability, diversity and inclusion, and counseling services (or equivalent) to ensure that all necessary accommodations are made to provide equal opportunities and resources to CROPPS students. They will coordinate visits, events, and activities that support the development of long-term relationships with Historically Black Colleges and Universities (HBCUs) and other Minority-Serving Institutions (MSIs). They will serve as a resource linking CROPPS participants with groups and programs that support informal and formal professional mentorship training for undergraduate students, graduate students, postdoctoral scholars, and faculty. Finally, they will compile materials and write content for the NSF annual report and for evaluation by advisory groups.

Qualifications
Individuals considering this position should have a bachelor’s degree and 3 to 5 years relevant experience or equivalent combination.  Individual must be a strong communicator; someone who can perform independently; and they must be a skilled team collaborator.  It is required the individual be able to communicate with and serve a diverse population of individuals spread across multiple states. The individual must be adaptable, flexible, and service-oriented, work well under pressure, and maintain an attention to detail at all times.  They must possess the capacity to maintain confidentiality of staff and student sensitive data.  Some background and prior experience in Diversity, Equity, and Inclusion issues.

Postdoctoral Scholar (Leiboff Lab)

11/4/2022

 
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Institution
Oregon State University
Location
Corvallis, OR, USA

Description
A postdoctoral scholar position is open in the laboratory of Dr. Samuel Leiboff for the genetic investigation of maize vein development. Veins transport solutes/water between organs and are therefore essential for addressing society’s need for improved agricultural and bioenergy performance during future environmental challenges. Recent genetic evidence in maize shows unanticipated physiological and genetic diversity amongst veins as demonstrated by the existence of specialized vein mutants. Many of these mutants are unmapped and their mechanism of action is unknown. Although each vein’s anatomical development is stereotyped, vein initiation events
are dynamic over the life of each plant and vary in position and developmental behavior within domains of the same organ. We seek a developmental biologist to join our team and shape the mechanistic investigation of the previously secret genetic language that defines maize veins.

We are currently engaged in single cell genomic and quantitative genetic investigations exploring the production of specialized veins at a genome-wide scale. The applicant will be responsible for the evaluation of candidate cell-specific markers and vein patterning alleles that are discovered by single cell RNA sequencing and GWAS. No prior informatics, machine learning, or quantitative genetics training is required, but would be available, should the applicant desire interdisciplinary training.

Qualifications
The applicant is required to have a recent Ph.D. in the biological sciences related to plant developmental biology, molecular biology, genetics, or genomics. Required skills include basic molecular biology, plant histology, microscopy, and genetic analysis.

Postdoctoral Associates (Baxter & Mockler Labs)

11/4/2022

 
Closed
Institution
Donald Danforth Plant Science Center
Location
Saint Louis, MO, USA

Description
The Baxter Lab and Mockler Lab at the Donald Danforth Plant Science Center are recruiting multiple enthusiastic postdoctoral associates to work on a DOE-funded project studying the response to abiotic stresses in Sorghum and Setaria. Candidates will work at the nexus of phenotyping, quantitative genetics, comparative genetics, and genomics. Large datasets from field and controlled environment phenotyping, genome sequencing, and transcriptomics are available, and more will be produced during the project.

Qualifications
  • Ph.D. in a field related to plant bioinformatics (i.e., plant biology, quantitative genetics, bioinformatics, genomics, computer science, statistics) is required
  • Experience in data science/bioinformatics, genomic data analysis, and statistical approaches

2 Postdoctoral Fellows (Jackson Lab)

11/4/2022

 
More Info
Institution
Cold Spring Harbor Laboratory
Location
Cold Spring Harbor, NY, USA

Description
The first position is to follow up on recent work using CRISPR editing of
regulatory elements to explore mechanisms of gene regulation in yield related
genes, and fine tune agronomic traits. Recent work from our collaborators has
started to identify deeply conserved cis-regulatory sequences in diverse plant
families, and these will be targeted by genome editing to test effects on maize
development and yield traits.

The second position aims to characterize the role of plasmodesmata in
plant development, focusing on cell to cell trafficking of the KNOTTED1/ STM
class of homeodomain proteins and associated mRNAs.

The Jackson Lab uses state of the art developmental biology, imaging and genomic
techniques to understand signaling in meristem development, using arabidopsis
and maize as model systems.

Data Science Associate (Topp Lab)

11/4/2022

 
Closed
Institution
Donald Danforth Plant Science Center
Location
Saint Louis, MO, USA

Description
The laboratory of Dr. Christopher Topp at the Donald Danforth Plant Science Center is a plant root phenomics lab, innovating uses of 3D imaging modalities to investigate roots and their environment. We are seeking someone interested in plant biology and image analysis to help process and measure digitized plant samples using both external and internal analysis tools.

This involves maintaining a robust computational infrastructureincluding dedicated workstations, storage and processing servers, virtual machines, internal code bases, third-party software licenses, VR systems, cloud storage, databases, resource provisioning, development environments, and data management. This plays a key role in cutting-edge research and analytics to solve problems in agricultural sustainability. The role allows for creativity and autonomy in the design and development of tools and procedures. The successful candidate will be organized, independent, creative, have strong communication skills, desire to learn, and work with outstanding collaborative capability.

Qualifications
  • B.Sc. in Computer Science, Computer Engineering, Information Technology or similar degree
  • Strong understanding or exposure to Linux operating systems and familiarity with tools used to manage packages (dnf/yum/apt), compiling from source (i.e., Makefile), and routine system maintenance and troubleshooting
  • Strong proficiency with Python and its ecosystem, including data science and scientific computing
  • Strong proficiency in C/C++ (Exposure Go is acceptable)
  • Familiar with relational databases (SQL)
  • Familiar with version control systems (Git) and GitHub
  • Comfortable working with custom file formats, both binary and plan text formats

Assistant Professor - Biology - Genetics/Genomics

10/12/2022

 
Apply Here
Institution
University of Massachusetts Amherst
Close Date
October 31, 2022
Location
Amherst, MA

Description
The Department of Biology at the University of Massachusetts Amherst invites applications for a full-time, tenure-track Assistant Professor position in any area of Eukaryotic Genetics/Genomics. The successful candidate will be expected to establish a vibrant, externally funded research program, effectively teach and mentor undergraduate and graduate students, and contribute to service in support of the department and college. Of particular importance, the successful candidate will have a demonstrated understanding of the strength that is brought to science through diversity, equity, inclusivity, and accessibility.

Although the search is unrestricted with respect to organism or approach, the successful candidate will have demonstrated expertise in genetic approaches and will contribute to the department's mission through teaching in modern genetics and/or genomics.

Qualifications
Candidates must have a Ph.D. or equivalent in Biology or a related field with relevant post-doctoral experience. As part of a commitment to our own multicultural community, we seek an individual with a demonstrated commitment to diversity and one who will understand and embrace university initiatives and aspirations.

Tenured/Tenure-track Faculty - Molecular Genetics

9/7/2022

 
Closed
Institution
Ohio State University
Open Date
August 2, 2022
Close Date
October 1, 2022
Location
Columbus, Ohio, USA

Description
The Ohio State University invites applicants to apply for two tenure-track faculty positions at the Assistant Professor level in the Department of Molecular Genetics. Investigators using any experimental system to address fundamentally important biological questions in any area of Developmental Biology, Cell Biology, and/or Molecular Epigenetics are encouraged to apply. Applicants with interest and expertise in imaging, quantitative biology, computational biology, systems biology, and/or integrated approaches will be especially competitive.

Qualifications
Candidates with PhD and/or MD degrees with research interests and at least two years of academic or equivalent postdoctoral experience in the specified areas are encouraged to apply. Strong applicants will have a record of creativity and excellence in research as well as a commitment to undergraduate and graduate teaching. Appointment is contingent on the university’s verification of credentials and other information required by law and/or university policies, including but not limited to a criminal background check.

Research Assistant (Rhee Lab)

6/15/2022

 
Closed
Institution
Carnegie Institution for Science
Open Date
June 8, 2022
Location
Stanford, CA, USA

Description
We are looking for a talented recent graduate to work as a Research Assistant (RA) in the laboratory of Dr. Sue Rhee at the Carnegie Institution for Science, Department of Plant Biology, located in Stanford, California. Our lab is generally interested in uncovering the molecular mechanisms of plant adaptation to environmental stresses. We work with different organisms ranging from model plant Arabidopsis thaliana to economically important crops such as Sorghum bicolor, an economically important bioenergy crop. We are looking for RA to work on the Sorghum Metabolic Atlas project. Our goal is to create a high-resolution cellular map of sorghum metabolic enzymes through deciphering enzyme localization within the cell. Information about enzyme localization contributes to the current understanding of enzyme functions and metabolic networks. We use a variety of cellular and molecular biology techniques to identify enzyme subcellular localization. The RA will be assisting a postdoc to scale up the scope of this project by conducting enzyme localization experiments from start-to-finish, which includes growing and maintaining plants, Gateway cloning to generate destination vectors, transient expression of enzymes followed by identifying localization through confocal microscopy.

We are looking for a highly motivated, organized and experienced recent graduate with a BS or BA degree in biology, cellular and molecular biology or related fields. The position is particularly relevant for students seeking more laboratory research experience before applying to graduate school. Experience in basic molecular biology techniques, including but not limited to, PCR amplification, cloning, plasmid isolation, and bacterial transformation is required. Knowledge about plant transient transformation is a plus. Previous experience in growing and maintaining plants is recommended.
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STANFORD LAND ACKNOWLEDGEMENT
“The Plant Cell Atlas operates predominantly out of the Carnegie Institution for Science's Plant Biology Department located at Stanford University. Stanford sits on the ancestral land of the Muwekma Ohlone Tribe. This land was and continues to be of great importance to the Ohlone people. Consistent with our values of community and inclusion, we have a responsibility to acknowledge, honor, and make visible the University’s relationship to Native peoples.”

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  • Home
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      • Plant Biotechnology
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