Institution
Earlham Institute Location Norwich, UK Salary £33,050 - £40,750 Open Date November 21, 2022 Close Date January 12, 2023 Description Dr Patron’s lab works on plant gene regulatory networks and metabolism, applying engineering approaches to understand biological complexity and advance plant biotechnology. In recent work, we have characterised a transcriptional regulatory network involved in modulating the architecture of root systems in response to changes in nutrient availability. This project will investigate how this network functions across cell types and examine how cell-type-specific responses to changes in the environment mediate developmental plasticity. This knowledge will be used to inform and enable cell-type specific engineering with the aim of predictably modulating plant responses to nutrients. The post holder will be responsible for the production and analysis of single-cell sequencing datasets and the construction and characterisation of engineered plants. They will also contribute to the development of single-cell sequencing methods and assist in the training and development of PhD students. Qualifications
Institution
Oregon State University Location Corvallis, OR, USA Description A postdoctoral scholar position is open in the laboratory of Dr. Samuel Leiboff for the genetic investigation of maize vein development. Veins transport solutes/water between organs and are therefore essential for addressing society’s need for improved agricultural and bioenergy performance during future environmental challenges. Recent genetic evidence in maize shows unanticipated physiological and genetic diversity amongst veins as demonstrated by the existence of specialized vein mutants. Many of these mutants are unmapped and their mechanism of action is unknown. Although each vein’s anatomical development is stereotyped, vein initiation events are dynamic over the life of each plant and vary in position and developmental behavior within domains of the same organ. We seek a developmental biologist to join our team and shape the mechanistic investigation of the previously secret genetic language that defines maize veins. We are currently engaged in single cell genomic and quantitative genetic investigations exploring the production of specialized veins at a genome-wide scale. The applicant will be responsible for the evaluation of candidate cell-specific markers and vein patterning alleles that are discovered by single cell RNA sequencing and GWAS. No prior informatics, machine learning, or quantitative genetics training is required, but would be available, should the applicant desire interdisciplinary training. Qualifications The applicant is required to have a recent Ph.D. in the biological sciences related to plant developmental biology, molecular biology, genetics, or genomics. Required skills include basic molecular biology, plant histology, microscopy, and genetic analysis. Institution
Donald Danforth Plant Science Center Location Saint Louis, MO, USA Description The Baxter Lab and Mockler Lab at the Donald Danforth Plant Science Center are recruiting multiple enthusiastic postdoctoral associates to work on a DOE-funded project studying the response to abiotic stresses in Sorghum and Setaria. Candidates will work at the nexus of phenotyping, quantitative genetics, comparative genetics, and genomics. Large datasets from field and controlled environment phenotyping, genome sequencing, and transcriptomics are available, and more will be produced during the project. Qualifications
Institution
Cold Spring Harbor Laboratory Location Cold Spring Harbor, NY, USA Description The first position is to follow up on recent work using CRISPR editing of regulatory elements to explore mechanisms of gene regulation in yield related genes, and fine tune agronomic traits. Recent work from our collaborators has started to identify deeply conserved cis-regulatory sequences in diverse plant families, and these will be targeted by genome editing to test effects on maize development and yield traits. The second position aims to characterize the role of plasmodesmata in plant development, focusing on cell to cell trafficking of the KNOTTED1/ STM class of homeodomain proteins and associated mRNAs. The Jackson Lab uses state of the art developmental biology, imaging and genomic techniques to understand signaling in meristem development, using arabidopsis and maize as model systems. Institution
University of Alberta Open Date April 18, 2022 Close Date June 15, 2022 Start Date August 2022 Location Edmonton, Alberta, Canada Description The candidate post-doctoral fellow will join the multi-year; multi-institutional Genome Canada funded project TRIA-FoR, which is based in the Department of Biological Sciences at the University of Alberta, Edmonton, Alberta, Canada in the laboratory of Dr. R. Glen Uhrig. The current TRIA-FoR project will employ quantitative proteomics in conjunction with advanced plant molecular biology, biochemistry, and genetics to characterize and validate host disease resistance targets related to mountain pine beetle. To do this, the candidate post-doctoral fellow will be expected to deploy a variety of cutting-edge techniques to accomplish this task. It is expected that the outcomes of this project will feed into the larger collaborative and applied research efforts of TRIA-FoR, aimed at enhancing pine resiliency to mountain pine beetle. Within the general scope of the project, the candidate post-doctoral fellow will be encouraged to develop independent and creative lines of inquiry, with support from Dr. R. Glen Uhrig, while being provided training and professional development support to prepare them for careers in either academia or industry. Qualifications
To Apply Interested applicants should send a 2-page CV to ruhrig[at]ualberta.ca that includes references. Institution
North Carolina State University Open Date February 24, 2022 Location Raleigh, NC, USA Description The Department of Plant and Microbial Biology at North Carolina State University invites applications for a Postdoctoral Research Scholar position in the lab of Dr. Terri Long. The Postdoctoral Research Scholar will collaborate with mathematical modelers to conduct hypothesis-driven molecular, genetic, and biochemical experimentation that will delineate the molecular rules underlying systemic Fe homeostasis in Arabidopsis. The candidate will be expected to contribute to a variety of studies to characterize protein function and dynamics in Arabidopsis that will require the use of in vitro protein analysis (ie. Immunoprecipitation, immunoblotting), as well as confocal, enzymatic, and physiological analysis. The candidate will be expected to design and conduct quality, substantive, and methodological research, and share and report research findings by publishing papers in peer-reviewed scientific journals and participating in research conferences, seminar series, and other appropriate professional activities. The postdoc will meet frequently with Dr. Long to discuss best practices in grant writing, manuscript preparation, and mentoring. The postdoc will also be expected to assist with training undergraduates and graduate students that will join the lab. Qualifications
Institution
University of Münster Application Review Date December 31, 2021 Close Date Open until filled Location Münster, Germany Description The Institute of Organismic and Molecular Evolution at the University of Mainz, Germany, invites applications for a Postdoc position in evolutionary single-cell genomics in the group of Evolutionary Plant Science and Biotic Interactions, headed by Prof. Shuqing Xu. Supported by other group members, the candidate will work on the evolution of gene functions and regulations at cellular level using use the state-of-the-art single-cell genomic tools. During the project, the candidate will mature his/her scientific skills and develop independence in project planning and management skills. The candidate is encouraged to apply for additional third-party funding to establish his/her own subgroup. Qualifications We are looking for a highly motivated researcher with a doctoral degree, or an equivalent thereof, in biology, evolutionary genetics, bioinformatics or computer science. The candidate is expected to design, conduct and organize the projects independently. Experience in analysing a large amount of next-generation sequencing data, in particular, single-cell sequencing and/or comparative genomics data, with a high degree of independence. A training background in bioinformatics, evolutionary genetics and single-cell sequencing is preferred. Applicants must demonstrate experience in statistics and genomics. Experience with molecular biology, epigenetics and computational modelling are a plus. Our group consists of people of various nationalities and teamwork is essential for all projects in the group. Therefore, excellent communication skills, as well as proficiency in spoken and written English, are expected. Good knowledge of German is a plus. Institution
VIB-UGent Center for Inflammation Research Open Date October 15, 2021 Location Ghent, Belgium Description The Data Mining and Modeling for Biomedicine group (headed by Yvan Saeys) at the VIB Center for Inflammation Research and Ghent University is located in the historical city of Ghent, Belgium. The Saeys lab is at the forefront of computational method development in single-cell omics and has a longstanding collaboration with many wet labs in immunology, oncology, and plant biology. Recently, the lab has started a single-cell facility with advanced access to the newest single-cell multi-omics technologies (scRNA-seq, scATAC-seq, CITE-seq, and spatial proteomics and transcriptomics). A major focus of the lab is to model the dynamics of biological systems and characterize their underlying gene regulatory networks. To this end, the lab develops new computational machine learning methods to improve the current state-of-the-art. The successful candidate will be responsible for developing novel methods (including trajectory inference and gene regulatory network inference) on single-cell omics data. The current position is part of a collaboration with BASF, a leading company in the plant biotechnology field, and the lab of Bert De Rybel at the VIB Center of Plant Systems Biology. Qualifications
Institution
Carnegie Institution for Science Location Stanford, CA, USA Earliest starting date November 1, 2021 Closing date Flexible, accepting applications until filled. Description The Burlacot lab is opening on October 1, 2021 at the Department of Plant Biology of the Carnegie Institution for Science. We will start a scientific journey in the study of the molecular mechanisms that allow photosynthesis to be the major CO2 cycling mechanism in the atmosphere. We are seeking for a highly motivated and creative person to start developing new methods for understanding the response of algal photosynthesis to fluctuating environments. We aim to recruit highly motivated and creative people with strong training in quantitative biophysics/ photosynthesis/ algal biology. Our lab aims to understand the acclimation of photosynthesis to environmental fluctuations and the dynamics of the molecular mechanisms involved. The questions that our lab aims to address are: How are microalgae dynamically reacting to environmental fluctuations? How do molecular mechanisms of photosynthesis dynamically interact to optimise cell survival and growth under fluctuating conditions? How do the different time scales of photosynthetic energy transfers combine at various time scales of light fluctuations? What genes are important for acclimation to such fluctuations? Can we modify key enzymes to make photosynthesis more robust to some environments? Qualifications
Institution
University of California, Los Angeles Location Los Angeles, CA, USA The Nikolov lab studies Plant Structure, Plant Development, and Plant Evolution. If you are interested in plant genetics and development, evolution, flowers, nectar, or Brassicaceae contact Dr. Nikolov (nikolov@ucla.edu) directly with inquiries and/or questions. |
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