PLANT CELL ATLAS
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Post-Doctoral Fellow (Uhrig Lab)

4/18/2022

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More Info
Institution
University of Alberta
Open Date
April 18, 2022
Close Date
June 15, 2022
Start Date

August 2022
Location
Edmonton, Alberta, Canada

Description
The candidate post-doctoral fellow will join the multi-year; multi-institutional Genome Canada
funded project TRIA-FoR, which is based in the Department of Biological Sciences at the
University of Alberta, Edmonton, Alberta, Canada in the laboratory of Dr. R. Glen Uhrig.

The current TRIA-FoR project will employ quantitative proteomics in conjunction with
advanced plant molecular biology, biochemistry, and genetics to characterize and validate host
disease resistance targets related to mountain pine beetle. To do this, the candidate post-doctoral fellow will be expected to deploy a variety of cutting-edge techniques to accomplish this task.

It is expected that the outcomes of this project will feed into the larger collaborative and applied research efforts of TRIA-FoR, aimed at enhancing pine resiliency to mountain pine beetle. Within the general scope of the project, the candidate post-doctoral fellow will be encouraged to develop independent and creative lines of inquiry, with support from Dr. R. Glen Uhrig, while being provided training and professional development support to prepare them for careers in either academia or industry.

Qualifications
  • A demonstrated ability to work both independently as well as part of a team.
  • Good communication skills and team work attitude, with a desire to mentor.
  • Demonstrated leadership abilities.
  • Broad ranging interest in plant science.
  • Experience with advanced molecular / biochemical techniques.

To Apply
Interested applicants should send a 2-page CV to ruhrig[at]ualberta.ca that includes references.
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Postdoctoral Research Scholar (Long Lab)

3/3/2022

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Institution
North Carolina State University
Open Date
February 24, 2022
Location
Raleigh, NC, USA

Description
The Department of Plant and Microbial Biology at North Carolina State University invites applications for a Postdoctoral Research Scholar position in the lab of Dr. Terri Long. The Postdoctoral Research Scholar will collaborate with mathematical modelers to conduct hypothesis-driven molecular, genetic, and biochemical experimentation that will delineate the molecular rules underlying systemic Fe homeostasis in Arabidopsis. The candidate will be expected to contribute to a variety of studies to characterize protein function and dynamics in Arabidopsis that will require the use of in vitro protein analysis (ie. Immunoprecipitation, immunoblotting), as well as confocal, enzymatic, and physiological analysis. The candidate will be expected to design and conduct quality, substantive, and methodological research, and share and report research findings by publishing papers in peer-reviewed scientific journals and participating in research conferences, seminar series, and other appropriate professional activities. The postdoc will meet frequently with Dr. Long to discuss best practices in grant writing, manuscript preparation, and mentoring. The postdoc will also be expected to assist with training undergraduates and graduate students that will join the lab.

Qualifications
  • Ph.D. in molecular biology, genetics, plant biology, or a related discipline.
  • Experience in plant transformation, analysis of transgenic plants, biochemistry, and confocal microscopy is required.
  • The successful candidate should be a highly self-motivated and dedicated individual with experience in sequencing analysis.
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Postdoctoral Fellow (Xu Lab)

12/20/2021

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Closed
Institution
University of Münster
Application Review Date
December 31, 2021
Close Date
Open until filled

Location
Münster, Germany

Description
The Institute of Organismic and Molecular Evolution at the University of Mainz, Germany, invites applications for a Postdoc position in evolutionary single-cell genomics in the group of Evolutionary Plant Science and Biotic Interactions, headed by Prof. Shuqing Xu. Supported by other group members, the candidate will work on the evolution of gene functions and regulations at cellular level using use the state-of-the-art single-cell genomic tools. During the project, the candidate will mature his/her scientific skills and develop independence in project planning and management skills. The candidate is encouraged to apply for additional third-party funding to establish his/her own subgroup.

Qualifications
We are looking for a highly motivated researcher with a doctoral degree, or an equivalent thereof, in biology, evolutionary genetics, bioinformatics or computer science. The candidate is expected to design, conduct and organize the projects independently. Experience in analysing a large amount of next-generation sequencing data, in particular, single-cell sequencing and/or comparative genomics data, with a high degree of independence. A training background in bioinformatics, evolutionary genetics and single-cell sequencing is preferred. Applicants must demonstrate experience in statistics and genomics. Experience with molecular biology, epigenetics and computational modelling are a plus. Our group consists of people of various nationalities and teamwork is essential for all projects in the group. Therefore, excellent communication skills, as well as proficiency in spoken and written English, are expected. Good knowledge of German is a plus.​
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Postdoctoral Associate (Saeys/De Rybel Labs)

11/1/2021

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Closed
Institution
VIB-UGent Center for Inflammation Research
Open Date
October 15, 2021
Location
Ghent, Belgium

Description
The Data Mining and Modeling for Biomedicine group (headed by Yvan Saeys) at the VIB Center for Inflammation Research and Ghent University is located in the historical city of Ghent, Belgium. The Saeys lab is at the forefront of computational method development in single-cell omics and has a longstanding collaboration with many wet labs in immunology, oncology, and plant biology.  Recently, the lab has started a single-cell facility with advanced access to the newest single-cell multi-omics technologies (scRNA-seq, scATAC-seq, CITE-seq, and spatial proteomics and transcriptomics). A major focus of the lab is to model the dynamics of biological systems and characterize their underlying gene regulatory networks.  To this end, the lab develops new computational machine learning methods to improve the current state-of-the-art.

The successful candidate will be responsible for developing novel methods (including trajectory inference and gene regulatory network inference) on single-cell omics data. The current position is part of a collaboration with BASF, a leading company in the plant biotechnology field, and the lab of Bert De Rybel at the VIB Center of Plant Systems Biology.

Qualifications
  • You obtained a Ph.D. in Bioinformatics, Computer Science, Physics, Engineering, Bio-engineering, or equivalent.
  • Excellent track record in machine learning applied to the field of Bioinformatics
  • Solid programming experience is required (Python, R).
  • Experience with machine-learning/statistical analysis is required
  • Experience with plant research and/or population genetics is a plus.
  • Ability to work independently and in a team.
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Associate in Research

11/1/2021

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Closed
Institution
Duke University, Biology
Location
Durham, NC, USA
Closing date
November 12, 2021

Description
The Benfey lab is a leading developmental biology lab located at Duke University. We are seeking to hire a full-time technician who will primarily work on a project examining single cell gene expression in the model plant Arabidopsis thaliana. Duties will include preparation of single cell RNA-Sequencing libraries, as well as tasks related to general molecular biology, and use/maintenance of a state of the art light sheet microscope. Training will be provided. This is a position suitable for a recent graduate seeking to obtain lab experience before graduate school, or anyone interested in working on a project using cutting edge technologies to help answer fundamental questions on developmental biology. Bachelor's degree in life sciences related field and experience in a molecular biology lab are required.
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PhD candidate - Molecular Plant Immunity

9/9/2021

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Closed
Open Date
September 8, 2021
Deadline
September 30, 2021
Institution
Institute of Biology Leiden, Leiden University
Location
Leiden, Netherlands

Description
Plant diseases occur everywhere and are one of the major threats to our agriculture. Understanding how disease resistance works is one of the long-term missions in the newly established group led by Dr. Ding, and also the key to protecting plant health.

The PhD project will focus on investigating gene regulatory mechanisms involved in immunity activated by intracellular nucleotide-binding leucine-rich-repeat (NB-LRR) receptors (NLRs). This research will continue on the recent discovery that NLR-activated transcription in-part potentiated the cell-surface receptor-mediated immunity (Ngou et al. Nature 2021; Ding et al. JXB 2021).

Qualifications
  • A master's degree in biology or related area
  • A strong curiosity in biology with an interes in plant sciences
  • A clear motivation in taking a PhD career and understanding of the commitment
  • Profound theoretical knowledge on and experience with molecular biology
  • Basic knowledge of chemistry, physics, mathematics and stasistics
  • Affinity with using computers and porficient skills with commonly used software
  • Good orginization habits and time management skills
  • Good communication and proficient English skills (both written and spoken)
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Postdoctoral Fellow Position in systems biology of photosynthesis

9/6/2021

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Closed
Institution
Carnegie Institution for Science
Location
Stanford, CA, USA
Earliest starting date
November 1, 2021
Closing date
Flexible, accepting applications until filled.

Description
The Burlacot lab is opening on October 1, 2021 at the Department of Plant Biology of the Carnegie Institution for Science. We will start a scientific journey in the study of the molecular mechanisms that allow photosynthesis to be the major CO2 cycling mechanism in the atmosphere. We are seeking for a highly motivated and creative person to start developing new methods for understanding the response of algal photosynthesis to fluctuating environments. We aim to recruit highly motivated and creative people with strong training in quantitative biophysics/ photosynthesis/ algal biology.

Our lab aims to understand the acclimation of photosynthesis to environmental fluctuations and the dynamics of the molecular mechanisms involved. The questions that our lab aims to address are: How are microalgae dynamically reacting to environmental fluctuations? How do molecular mechanisms of photosynthesis dynamically interact to optimise cell survival and growth under fluctuating conditions? How do the different time scales of photosynthetic energy transfers combine at various time scales of light fluctuations? What genes are important for acclimation to such fluctuations? Can we modify key enzymes to make photosynthesis more robust to some environments?

Qualifications
  • PhD in Plant science, Microbiology, Biophysics or a related field.
  • Track record of research productivity and creativity.
  • Willingness to take responsibilities in a small team and to interact closely with colleagues.
  • Willingness to take part in building a dynamic, inclusive and interactive lab atmosphere.
  • Willingness to develop synergistic interactions with other labs from the Carnegie Institution for Science and from Stanford University.
  • Programming skills: ability to develop and implement simple codes in Python and/or Mathlab to treat and analyse large data set automatically.
  • A willingness to promote science through popularization and track record of previously taken actions are a plus.
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Lab Technician

9/6/2021

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Closed
Institution
Carnegie Institution for Science
Location
Stanford, CA, USA
Earliest starting date
October 1, 2021
Closing date
Flexible, accepting applications until filled. Will start assessing applications on September 1, 2021.

Description
The Burlacot lab is opening on October 1, 2021 at the Department of Plant Biology of the Carnegie Institution for Science. We will start a scientific journey in the study of the molecular mechanisms that allow photosynthesis to be the major CO2 cycling mechanism in the atmosphere. We are seeking a molecular biology and algal physiology Lab Technician to help set up the lab and start new research programs in algal biology. We aim to recruit highly motivated and creative people with strong training in microbiology and molecular biology.

Our lab aims to understand the acclimation of photosynthesis to environmental fluctuations and the dynamics of the molecular mechanisms involved. The questions that our lab aims to address are: How are microalgae dynamically reacting to environmental fluctuations? How do molecular mechanisms of photosynthesis dynamically interact to optimize cell survival and growth under fluctuating conditions? How do the different time scales of photosynthetic energy transfers combine at various time scales of light fluctuations? What genes are important for acclimation to such fluctuations? Can we modify key enzymes to make photosynthesis more robust to some environments?

Qualifications
  • Bachelor degree in microbiology, Plant science, cell biology or a related field.
  • Good skills in microbiology and molecular biology.
  • Basic lab skills, preparing solutions, and sterile technique.
  • Proficiency in MS Word, Excel and Powerpoint required.
  • Willingness to take responsibilities in a small team and to actively contribute to develop the lab organisation.
  • Willingness to take part in building a dynamic, inclusive and interactive lab atmosphere.
  • Willingness to develop synergistic interactions with other labs from the Carnegie Institution for Science and from Stanford University.
  • Programming skills: ability to develop and implement simple codes in Python and/or Mathlab will be appreciated.
  • Prior experience with microalgae or plants is a plus but is not necessary.
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Postdoctoral Associate (Nikolov Lab)

9/6/2021

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More Info
Institution
University of California, Los Angeles
Location
Los Angeles, CA, USA

The Nikolov lab studies Plant Structure, Plant Development, and Plant Evolution. If you are interested in plant genetics and development, evolution, flowers, nectar, or Brassicaceae contact Dr. Nikolov (nikolov@ucla.edu) directly with inquiries and/or questions.
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Postdoctoral Fellow (Brophy Lab)

9/6/2021

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More Info
Institution
Stanford University
Location
Stanford, CA, USA

Description
The  Brophy Lab  is looking for creative people to help us grow the lab! Our primary expertise is in synthetic biology, plant biology, microbiology and genetics, though we are eager to grow our team in any area. To apply email Dr. Jenn Brophy (jennbrophy at gmail dot com) with a cover letter and CV.
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STANFORD LAND ACKNOWLEDGEMENT
“The Plant Cell Atlas operates predominantly out of the Carnegie Institution for Science's Plant Biology Department located at Stanford University. Stanford sits on the ancestral land of the Muwekma Ohlone Tribe. This land was and continues to be of great importance to the Ohlone people. Consistent with our values of community and inclusion, we have a responsibility to acknowledge, honor, and make visible the University’s relationship to Native peoples.”
Carnegie Institution for Science
Department of Plant Biology
260 Panama St.
​Stanford, CA 94305
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Grant #'s: 1916797 & 2052590
Carnegie Science logo on the left. The logo depicts a circle with a sytlized dark blue starry sky at the top, a brown ammonite fossile on the bottem left, and a stylized green leaf on the right. Text to the right of the logo states
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  • Home
  • About
    • People >
      • New People
    • Motivation
    • Goals
    • Milestones
    • Affilations
    • News >
      • Breaking News
      • Past News
    • Code of Conduct
  • Events
    • PCA Multiplex Microscopy Symposium - May 2022 >
      • Organizers
    • 2021 PCA Symposium - Dec 2021 >
      • About
      • Registration
      • Abstract Submission
      • Speakers
      • Schedule
      • Organizers
    • Spatial Metabolomics Workshop - Oct 2021 >
      • Organizers
    • Writing Accountability Group - Sept 2021 >
      • Organizers
    • Career Panel - Jul 2021 >
      • Organizers
    • ICAR 2021 Mini-Symposia >
      • Quantitative Imaging
      • Arabidopsis Algorithm
      • Quantitative Development
      • Quantitative Proteomics
      • Organizers
      • Single-cell Landscape
      • Arabidopsis Informatics
    • Spatial Proteomics Workshop - Apr 2021 >
      • Organizers
    • Single Cell Sequencing Workshop - Feb 2021 >
      • Organizers
    • Inaugural Workshop - May/Jun 2020 >
      • Organizers
  • Resources
    • PB22 Travel Award
    • Job Posts
    • Fellowships
    • Publications >
      • 2022 Plant Physiology Focus Issue
    • PCA Videos
  • Outreach
    • PCA Art Exhibit >
      • About
      • Plant Biotechnology
      • Black Plant Scientists
      • Bowie State University
      • Howard University
      • Morgan State University
    • Futurum Brochure
  • Contact