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2026 Plant Cell Atlas SynBio Hackathon
Cambridge, MA, USA
July 12-13, 2026
​Applications due JUNE 1, 2026

 

Hackathon Description

The PCA SynBio Hackathon is a time-bound competitive event in which participants will work to design synthetic genetic circuits to program plants with new functions.

The Hackathon will commence with 90 minutes of training to equip participants with the latest synthetic biology knowledge and skills. Training will include genetic circuit design, how to design plasmids for synthesis, and methods of validating circuit function in planta. Following the initial training, participants will form teams that select a problem in plant biology (or in a team member’s research) to address with synthetic biology. Teams will design circuits and develop a pitch deck that explains the selected problem and solution. Organizers will be on hand to answer technical questions.

Teams will have ~20 hours to develop their pitch and construct designs. At the conclusion of the Day 2, all teams will make a 10-minute pitch about their design and its potential impact to a panel of mentors and judges, who will provide feedback and encouragement.


The best pitches will win free plasmid synthesis kindly provided by our sponsors at Twist Bioscience. Winning design(s) will be subject to final checks before commercial DNA synthesis. Plasmids will then be delivered directly to participants, and the participant will be responsible for plant transformation.

NOTE: 
Participants will be required to formally agree to receive and analyze any constructs that they should be awarded, including taking responsibility for import/export documentation (and costs) if applicable. They must also agree to write a report for the PCA on the outcomes of their experiments with these constructs within 12 months of receiving DNA. Finally, they must agree to acknowledge the support and assistance of the PCA in any resulting publications.
SynBio Hackathon Organizers
  • Nicola Patron, University of Cambridge
  • Jenn Brophy, Stanford University
  • Alex Borowsky, Stanford University

Event Details

Date: July 12-13, 2026

Time (EDT):

Start: TBD
End: TBD


Location:
Massachusetts Institute of Technology (MIT)
Cambridge, Massachusetts, USA

PCA Code of Conduct
Picture
Projection of a confocal image stack showing the edge of a cotyledon. Pavement cells and guard cells are visible. Photo credit: D. Ehrhardt
Projection of a confocal image stack showing the edge of a cotyledon. Pavement cells and guard cells are visible. Photo credit: D. Ehrhardt
Arabidopsis trichome with the nucleus marked by two different histone H3 proteins fused to fluorescent reporters. Cover of TPJ, vol 83, issue 1. Photo credit: S. Otero
Arabidopsis trichome with the nucleus marked by two different histone H3 proteins fused to fluorescent reporters. Cover of TPJ, vol 83, issue 1. Photo credit: S. Otero
Cross section of a DAPI stained Populous tremula dormant leaf bud. Photo credit: S. Giacomello and B. Terebieniec
Cross section of a DAPI stained Populous tremula dormant leaf bud. Photo credit: S. Giacomello and B. Terebieniec

Eligibility

The hackathon is open to all non-faculty researchers (postgraduate students, postdoctoral researchers, research assistants, technicians) based at academic, government, or non-profit organizations. 
 

Hackathon Application

Apply
Hackathon Application Deadline:  June 1, 2026

There is no fee to apply to the Hackathon. 

Places at the Plant SynBio hackathon will be limited to 24 researchers. To register your interest in participating, please use the button above to submit a paragraph of no more than 250 words, briefly describing your current work and how participation in the Hackathon will benefit your research and career goals. You must also include a sentence confirming that you have discussed attendance with your supervisor, and that they agree to support the analysis of any engineered plants that result from the hackathon.


Application statements should be no longer than 250 words submitted as a PDF or Word document. Please include:
  • Name
  • Affiliation
  • Statement on how participating in the Hackathon will benefit your research and career goals (250 word max).
    • Includes a sentence confirming that you have discussed attendance with your supervisor, and that they agree to support the analysis of any engineered plants that result from the hackathon.

Successful applicants will be notified by email.
Epidermal plasma membrane in green and nuclei (H2B-TFP) in blue, together with chlorophyll autofluorescence in red below in the mesophyll. Photo credit: Kate Harline (Roeder Lab)
Epidermal plasma membrane in green and nuclei (H2B-TFP) in blue, together with chlorophyll autofluorescence in red below in the mesophyll. Photo credit: Kate Harline (Roeder Lab)
Pin1-YFP (yellow) and DR5::RFP (red) in the maize shoot apex. Photo credit: Leiboff Lab
Pin1-YFP (yellow) and DR5::RFP (red) in the maize shoot apex. Photo credit: Leiboff Lab
Depth-coded image of microtubules in root hairs of the model grass, Brachypodium distachyon. Photo credit: Elison Blancaflor
 

Schedule - TBA

Hackathon Application Deadline: June 1, 2026
Protein bodies in maize endosperm, Marisa Otegui
Electron tomographic reconstruction of protein bodies in maize endosperm. Photo Credit: Marisa Otegui
Arabidopsis cotyledon, Flavia Bossi
Reconstruction of an Arabidopsis first leaf from a six-day old seedling. Photo Credit: Flavia Bossi
Developing maize aleurone cell, Marisa Otegui
Electron tomographic reconstruction of a developing maize aleurone cell. Photo Credit: Marisa Otegui
MICHIGAN STATE UNIVERSITY LAND ACKNOWLEDGEMENT
“The Plant Cell Atlas operates predominantly out of Michigan State University. We acknowledge that Michigan State University occupies the ancestral, traditional, and contemporary Lands of the Anishinaabeg – the Three Fires Confederacy of Ojibwe, Odawa, and Potawatomi peoples. We affirm Indigenous sovereignty and hold Michigan State University accountable to the needs of American Indian and Indigenous peoples.”
For questions about the PCA Initiative please contact us at [email protected].

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612 Wilson Rd
East Lansing, MI 48824

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Grant #'s: MCB-1916797, MCB-2052590 & MCB-2420360
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  • Home
  • About
    • Annual Report
    • Newsletter
    • People
    • Motivation
    • Goals
    • Milestones
    • Affilations
    • News >
      • Breaking News
      • Past News
    • Code of Conduct
    • Bylaws
    • Contact
  • Resources
    • SCEA Papers
    • Publications >
      • 2022 Plant Physiology Focus Issue
    • Tools and Repositories
    • PCA Videos
  • Events
    • Upcoming Events
    • Previous Events
    • 2026 SynBio Hackathon
  • Opportunities
    • Job Posts
    • Fellowships
  • Outreach
    • JR Biotek-PCA Best Talk Winner
    • PCA Art Exhibit >
      • About
      • Plant Biotechnology
      • Black Plant Scientists
      • Bowie State University
      • Howard University
      • Morgan State University
    • Futurum Brochure
  • Blog